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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909062.1_cds_XP_016459329.1_52867
CDS Infomation

[gene=LOC107782899] [db_xref=GeneID:107782899] [protein=chitin elicitor receptor kinase 1-like] [protein_id=XP_016459329.1] [location=join(5193..5829,9080..9113,9227..9231,9357..9509,9747..9948,10315..10408,12026..12119,12226..12377,12456..12547,12787..12925,13096..13194,13282..13446)] [gbkey=CDS]
Sequence

ATGTTTGAATCCAGACAAAGAAGTTTTTTAAGCTTAGGAATTATCCTTATCACAGTTTAC
TTATCCTCCAATTCTATACCAGTTGAGTCCAGTTGCAATAAAGGGTGCGATTTAGCTTTA
GGTTCATTCTACGTTTGGCGGGGGACAAATCTTACTCACATATCACAGTTATTCTCCGTT
TCTAGTAGACAAGAAATCATGGACTACAACAATAACATACCTAATCAGGACAGTGTTATA
GCAGGGACAAGAATTAACATACCCTTCAGTTGTGATTGTTTGGATGGTGAGTTCTTAGGC
CATGTTTTTCCGCACAAGGTTAAATCTGGAGATACATATGCTCGGGTTGCGTCGAATTAT
TCGGATTTAACGACAGTGGATTTGTTGAAGACGTTTAATCGCCATCCTGAGAATAATATT
CCAGATGATGTTACCTTAAACGTGGTTGTGAATTGCTATTGTGGGAATAAAGATGTTTCT
GAAGATTTTGGGCTATTTGTGACGTATCCTTTGAGGCCCGAGGATAACTTGACGGCCTTG
GTTTCCACGTCCAATGTCAGTGCTGATTTAATTCGGAGTTATAATCCAGGAGCTAATTTC
AGTGCTGGGAAAGGAATTGTATTTATACCGGGACGAGATAAAAGTGGGAACTTTCCGCCA
CTGCCAATAAGTACAGGTATTTCTGGTGGAGCAATAGCTGGGATATCTGTAGGAGCAATA
GCAGTAGTCTTGCTGCTGGCTGGTTTGGTTTACGTAGGATGTTATAGGAAGAAAGCACAA
AAGGTTTCGCTGCTCTCTTCCGAAGACCACCTCCATCACTCTAGTCATGGCCCAGAAGGC
AGCACGACAGTTAAAGCTGCAGATTCCGGTCGCCTGGCTGATGGCAATTCTCCAGGGATT
TCAGGCATAACGGTGGATAAATCTGTTGAGTTCACTTATGAAGAGCTTGCTACTGCAACT
AATGACTTCAGCATTGCTAACAAAATCGGACAAGGTGGTTTTGGTGCTGAGATGTTCTTT
AATCTTACTTCTCAGAAAGCGGCTATTAAGAAAATGGACATGGAAGCTACAAGGGAGTTT
CTTGCTGAATTAAAGGTCTTGACACATGTTCATCATCTGAATCTGGTGCGGTTGATAGGC
TACTGTGTTGAAGGCTCCCTCTTCCTTGTATATGAATACGTTGAGAATGGCCACATAGGC
CAACATCTGCGTGGTACAGGAAGGGACCCATTGCCATGGTCTACTAGGGTTCAAATTGCT
TTGGATTCAGCTAGAGGTCTTGAGTACATACATGAGCACACCGTACCAGTTTACATCCAT
CGTGATATTAAAACAGCAAATATTCTGATAGACAAAAACTTCCATGCAAAGGTTGCAGAT
TTTGGATTAACAAAACTGACTGAAGTTGGAAGTTCATCTTTGCAAACACGACTCGTTGGT
ACTTTTGGATACATGCCTCCGGAGTATGCTCAATATGGTGATGTCTCTCCTAAAGTTGAT
GTCTATGCTTTTGGTGTTGTCCTATATGAACTTATTTCAGCCAAGGAAGCGATAGTCAAG
CCAAATGAATCTGTTACTGAATCAAAGGGTCTTGTTGGTTTGTTTGAAGAAGTACTTAAT
CAGCCAGAACCTGATGAAGACCTTCGCAAACTGGTTGACCCAAGACTTGGAAATGACTAT
CCCCTTGATTCAGTCCGCAAGATGGCGCAGCTTGCCAAAGCTTGCACCCATGAAAATCCT
CTAATAAGGCCAAGTATGAGATCAATAGTGGTTGCGCTGATGACACTCTCTTCATCGACA
GAAGATTGGGATGTTGGATCTTTCTATGGGAACCAAGGTCTTATAAATCTTATGTCCGGA
AGATAG

Peptide Sequence

PEP ID

XP_016459329.1
PEP Infomation

PREDICTED: chitin elicitor receptor kinase 1-like [Nicotiana tabacum]
Sequence

MFESRQRSFLSLGIILITVYLSSNSIPVESSCNKGCDLALGSFYVWRGTNLTHISQLFSV
SSRQEIMDYNNNIPNQDSVIAGTRINIPFSCDCLDGEFLGHVFPHKVKSGDTYARVASNY
SDLTTVDLLKTFNRHPENNIPDDVTLNVVVNCYCGNKDVSEDFGLFVTYPLRPEDNLTAL
VSTSNVSADLIRSYNPGANFSAGKGIVFIPGRDKSGNFPPLPISTGISGGAIAGISVGAI
AVVLLLAGLVYVGCYRKKAQKVSLLSSEDHLHHSSHGPEGSTTVKAADSGRLADGNSPGI
SGITVDKSVEFTYEELATATNDFSIANKIGQGGFGAEMFFNLTSQKAAIKKMDMEATREF
LAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYVENGHIGQHLRGTGRDPLPWSTRVQIA
LDSARGLEYIHEHTVPVYIHRDIKTANILIDKNFHAKVADFGLTKLTEVGSSSLQTRLVG
TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKPNESVTESKGLVGLFEEVLN
QPEPDEDLRKLVDPRLGNDYPLDSVRKMAQLAKACTHENPLIRPSMRSIVVALMTLSSST
EDWDVGSFYGNQGLINLMSGR

Transcript Sequence

Gene sequence data has not been registered.